PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531239.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 212aa    MW: 23429.4 Da    PI: 9.9454
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-192675255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa a+++a+++++g
  XP_023531239.1 26 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAYAYDNAARQFRG 75
                    69*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MVSKEKSTAK KLPSLCNTNN NARELHFRGV RKRPWGRYAA EIRDPGKKSR VWLGTFDTAE  60
EAAYAYDNAA RQFRGAKAKT NFPPPDELID VSPRKISHSP SPSSTVESSS SSSQEKTPSP  120
EIVRSYGVAR TFPFIQPQFL HQVGGGGTAR PVLFMDAFVR PEFVAQGYPI RYDSARFAAE  180
IQTKSDSLSV VDCRPAKEIL NLDLNLAPPV DA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.13e-33ERF family protein