PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531264.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 440aa MW: 49109.8 Da PI: 7.7666

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.5e-32	237	292	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_023531264.1 237 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 292 68****************************************************97 PP
2	Myb_DNA-binding	40.5	6.5e-13	239	290	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_023531264.1 239 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 290 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MASTQLSLEC QVQSYSMLLQ YSFGDQHQVP PNSHDFYYKL QEFVSRLEQE RLKIDVFKRE 60 LPLSVETSRR QLQACKAIEA PPSKPVLEQF MPLKNSTTPD DEKPPTILSD KANWMTSLQL 120 WSQANKEYTD PPHSHNNNNN SDTRKQRVSN GDFVPFDKDR NLEPGLGVGG GGVNGVAAEM 180 ELLEKGEKKE KKNHCGDTNN NVDGGIVTPT EDRAERGAGE VGLAPTTSST TAQTHRKARR 240 CWSPDLHRRF VNALQMLGGS QVATPKQIRE LMKVDGLTND EVKSHLQKYR LHTVRRPSLA 300 PQASGSPAAQ LVVLGLGGLW VPPEYARSPT LYGPPATSHP PSHFYTPASV PQEYYTRTIA 360 PPHLQQHHHQ VHLYKGEPTK AAQISPASEV RDTAERSESL EEEKSEGGQN GEDRRIKGRG 420 SWGRRLEGEE SNRSEVSLKF

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MASTQLSLEC QVQSYSMLLQ YSFGDQHQVP PNSHDFYYKL QEFVSRLEQE RLKIDVFKRE  60
LPLSVETSRR QLQACKAIEA PPSKPVLEQF MPLKNSTTPD DEKPPTILSD KANWMTSLQL  120
WSQANKEYTD PPHSHNNNNN SDTRKQRVSN GDFVPFDKDR NLEPGLGVGG GGVNGVAAEM  180
ELLEKGEKKE KKNHCGDTNN NVDGGIVTPT EDRAERGAGE VGLAPTTSST TAQTHRKARR  240
CWSPDLHRRF VNALQMLGGS QVATPKQIRE LMKVDGLTND EVKSHLQKYR LHTVRRPSLA  300
PQASGSPAAQ LVVLGLGGLW VPPEYARSPT LYGPPATSHP PSHFYTPASV PQEYYTRTIA  360
PPHLQQHHHQ VHLYKGEPTK AAQISPASEV RDTAERSESL EEEKSEGGQN GEDRRIKGRG  420
SWGRRLEGEE SNRSEVSLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-75	G2-like family protein