PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531403.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB
Protein Properties Length: 244aa    MW: 27883.8 Da    PI: 7.3902
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.61e-161562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEd++l+ +v+++G  +W+  ++  g+ R++k+c++rw +yl
   XP_023531403.1 15 KGVWTPEEDQKLISYVNRYGHWNWRQLPKFAGLSRCGKSCRLRWMNYL 62
                     799*****************99************************97 PP
2Myb_DNA-binding47.54e-1568113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g +++ E+e++v+     Gg+ W+t a+ m+ gRt++++k++w+++l
   XP_023531403.1  68 KGGFSKKEEEIIVKMYSAIGGR-WSTMASLMP-GRTDNHIKNHWNTVL 113
                      5779******************.*********.************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MAKCCCCCDQ IQVKKGVWTP EEDQKLISYV NRYGHWNWRQ LPKFAGLSRC GKSCRLRWMN  60
YLRPDIRKGG FSKKEEEIIV KMYSAIGGRW STMASLMPGR TDNHIKNHWN TVLKRRVLQK  120
NVSRTMANKP PPPPSPPLPP ATKSPIHEGF SGESLSSNDN STLIVNSTAL ESVLIQTIET  180
STAGNIDMLP ANDRPPVSST GDFWTDPLWL DSDFDLPFDY HQDLEEPIFP KFGLDEYIFQ  240
EELY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.16e-52MYB family protein