PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531433.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 265aa    MW: 29034.1 Da    PI: 5.6573
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.7e-1766116155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + ++GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  XP_023531433.1  66 PVFRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALTIKG 116
                     579****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MARLIVHNDP AILNSSSSSS TSSSSTSSSS SSSVESDQAG AAIAVDSNRK RAKRPRESSN  60
GNSKHPVFRG VRMRAWGKWV SEIREPRKKS RIWLGTFSTP EMAARAHDVA ALTIKGNSAI  120
LNFPQLAHQF PRPASNSPRD VQAAAAKAAS MELPTPPLPT PSSSSSSSSS SSGLCPSTPE  180
ELSEIVELPS LGTSYETTEL GKEFVFADSL EGWLYSYPWY NRVSNVEEEE EEEDYRLFGD  240
QISMADYTHT WIPTTTPFET FLWPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-63ERF family protein