PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531607.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family TCP
Protein Properties Length: 332aa    MW: 35859.1 Da    PI: 8.3589
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP119.73.5e-3751270289
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 
                     a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+  a++ s+s++  s +        
  XP_023531607.1  51 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAVAGSVSQQGVSLSaglqqkle 145
                     789******************************************************************88866666666663333344544455 PP

             TCP  89 ............................................................................................... 88 
                                                                                                                    
  XP_023531607.1 146 elggggssraswgnlgrphlaaaaaaaaaaatatavwpssvsgfgfqssttagvaqsatnlanetsnyfhklgfpafdlpptnmgpmsftsilga 240
                     56666666666666666666666666655556666666555555555555555555555555555556666666666666666666666666666 PP

             TCP  89 .............................k 89 
                                                   
  XP_023531607.1 241 ntqqlpglelglsqdphigainpqalnqfY 270
                     666666666666666666555555555541 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MDPKTSSSTT KQPQELVPNF LNFPQEHQQE QSIMGENKPP EIKEEGKKQL APKRSSNKDR  60
HTKVEGRGRR IRMPALCAAR IFQLTRELGH KSDGETIQWL LQQAEPSIIA ATGTGTIPAS  120
ALAAVAGSVS QQGVSLSAGL QQKLEELGGG GSSRASWGNL GRPHLAAAAA AAAAAATATA  180
VWPSSVSGFG FQSSTTAGVA QSATNLANET SNYFHKLGFP AFDLPPTNMG PMSFTSILGA  240
NTQQLPGLEL GLSQDPHIGA INPQALNQFY QQMGQARVHH HHQQHQQPPA KDDSQDSGER  300
ERKRERERDL YLVCTSSPCE WQSFKLFFTC QV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.12e-66TCP family protein