PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531680.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 236aa    MW: 27310.6 Da    PI: 8.7906
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531680.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1162.3e-36151072103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++++sw ++ ++fvv+ + efa++vLp+yFkh+nf+SFvRQLn+YgFkkv  e+         weF +++Fkkg+k+ll++
  XP_023531680.1  15 FLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKHNNFSSFVRQLNTYGFKKVVAER---------WEFGNENFKKGEKQLLSQ 100
                     9****************************************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+r+ks+
  XP_023531680.1 101 IHRRKSH 107
                     ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MEQMIEGDKP NPAPFLTKTY DLVDDPRTDH VVSWGQSHST FVVWSPPEFA THVLPNYFKH  60
NNFSSFVRQL NTYGFKKVVA ERWEFGNENF KKGEKQLLSQ IHRRKSHNYN NNNNNTNNLQ  120
FFHLHGELFT ATSSSDSDVL AALTQDNRRL RRRNFMLLSE LTQMKNLYSD IIYFIQNHVK  180
PFDQRNGKWV AKLVELEAPP PQVAVAEAAG ESEEVKLFGV PIRGKKRGAS DEEDRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.13e-64HSF family protein