PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531686.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 138aa    MW: 15667.8 Da    PI: 8.4411
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.4e-0969115347
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 
                      +WT+   + + +a +++  +   +W  +ar +g g+t++++k ++q +
   XP_023531686.1  69 SWTAKQNKAFEEALARYDRDtpdRWLNVARAVG-GKTEEEVKRHYQLL 115
                      6*****************99*************.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MPFKGNNISH CPIGFAPPIN LLNPSYKDHP LPSLLPHTLP FFPLQPFEPF LPYFYTIIMA  60
SMSSHGSASW TAKQNKAFEE ALARYDRDTP DRWLNVARAV GGKTEEEVKR HYQLLVEDVK  120
FIESGRVPYP YRNSGASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.18e-33MYB_related family protein