PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531689.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 251aa    MW: 28731.7 Da    PI: 7.3228
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.61e-0865113655
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55 
                      ++E++RR+++++  ++L +llP+ +   +++  l   +   +Av+YIk+L+
  XP_023531689.1  65 RIVEKNRRNQMKTLCSQLNSLLPNqD---SKEIsLALPDQIDEAVKYIKELE 113
                     689*********************55...666678889***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MTSFHYLTKS LYPLRIIVYK SHLSSSHFCN LLLHLLLLLH RPLHQMDRHF QFSTSSSSAA  60
KIERRIVEKN RRNQMKTLCS QLNSLLPNQD SKEISLALPD QIDEAVKYIK ELEKKVNLAK  120
EKKEKLEGKN KSSMNIESSS SSSASPQLKI HQSGRSLEII LSSGLDNQYL FSETISILQE  180
EGVEVVNASF SVSGSSVFQT FHAQLEGSMI EFEAAKVTER LKRLVYGSNS DMELQKEKQW  240
WDEFPSDDLD Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-21bHLH family protein