PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531698.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 296aa    MW: 32928.7 Da    PI: 5.4935
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531698.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.3e-1375118855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er RR+r+++ f++L  l+P++     +K +K++i+ +Av+YIk  q
  XP_023531698.1  75 TERERRKRMRNMFSNLHALIPHL----PPKADKSTIVDEAVNYIKTVQ 118
                     6*********************6....39****************877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MSAPHNIWAF LNSASDVDID IDLDDDNDND NSNDKSPANT DLLPPLPLSG RKREAVEGRP  60
GGGGESTEHE IHIWTERERR KRMRNMFSNL HALIPHLPPK ADKSTIVDEA VNYIKTVQQT  120
LQTLYNQKLE KLQNNNPAVS YKATHYYPEQ QQQQQQSNST TTTHQAFLAD QASSSNGMSS  180
TLLPPPPLPP LPPPFSDTTT TFQTWTSSNL VLSICGGEAH FCICSVKKSG LFAAVCYILD  240
KHQIEVVSAH VSSDFHRTFF MIQGHVNGSW DEFGAAMVAE EMFKQAAGEI NFWLSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.15e-50bHLH family protein