PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531750.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 191aa    MW: 21920.7 Da    PI: 5.321
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1072.3e-33111261128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeelvv++L++k++  +++  +vi+++ ++ ++Pw+Lp k+ +e ++wyf+s++           r+t++gyW+  g+d++v+++
  XP_023531750.1  11 LPPGFRFYPTDEELVVHFLHRKAALLPCHP-DVIPDLALFPYDPWELPGKALGEGNQWYFYSRKTD--------ARVTANGYWNPLGRDEPVVAS 96 
                     79*************************999.99***************87778899******9855........699***************998 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + e+vg+kk + f+ g+a    kt+Wvmheyrl
  XP_023531750.1  97 aTAEVVGMKKYFLFHVGDA----KTNWVMHEYRL 126
                     67888**********6655....79*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MDAAHTNNFI LPPGFRFYPT DEELVVHFLH RKAALLPCHP DVIPDLALFP YDPWELPGKA  60
LGEGNQWYFY SRKTDARVTA NGYWNPLGRD EPVVASATAE VVGMKKYFLF HVGDAKTNWV  120
MHEYRLYNAA SAAAAGRSSR RRGRPKRDYS KWVLCRVYEE EEEEGAELSC LDEVFLTLDD  180
LDEISLPDRL H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141148RRGRPKRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-81NAC family protein