PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531765.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 203aa MW: 22211.6 Da PI: 8.2478

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.1	6.6e-05	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ksFs+ L H ++H XP_023531765.1 53 YSCSVCNKSFSSYQALGGHKSSH 75 99************999999988 PP
2	zf-C2H2	11.8	0.00075	99	121	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k+F++ L H r+H XP_023531765.1 99 HQCSICFKCFPTGQALGGHKRRH 121 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MALQALNSPT EPWVKPSKRS THPPLDSDDQ HLAFSLLMLA HGGNIPSPTK LPYSCSVCNK 60 SFSSYQALGG HKSSHRKSDA AADTDSTTTS AVSSSTRTHQ CSICFKCFPT GQALGGHKRR 120 HYDGNNNKTL AAGSDSNGDS TLTHTHVRDF DLNVPASPEF SPRFPDREKS QSQSQSQIQE 180 KYVEEEVQSP HPLKKPRLLL PVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	1e-35	C2H2 family protein