PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531826.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 200aa MW: 23310.3 Da PI: 9.5218

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531826.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+++++ +G g W++ a g++R +k+c++rw++yl XP_023531826.1 17 KGPWTMEEDLILINYIANHGEGVWNSLALSAGLKRNGKSCRLRWLNYL 64 79****************************9***********97 PP
2	Myb_DNA-binding	53.8	4.6e-17	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l++++++++G++ W++Ia++++ gRt++++k++w++ XP_023531826.1 70 RGNITSDEQLLIIELHAKWGNK-WSKIAKHLP-GRTDNEIKNYWRT 113 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MDRKACNSAE GVVEVRKGPW TMEEDLILIN YIANHGEGVW NSLALSAGLK RNGKSCRLRW 60 LNYLHPNVRR GNITSDEQLL IIELHAKWGN KWSKIAKHLP GRTDNEIKNY WRTRIQKHVK 120 QGYHRFNARQ TSSKATSRDR NQVNEEAPSS YTMDPIMETY SPPNYTQNLD AFSLPLLPID 180 HSNQNYWSME DLWSMQLLNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	7e-82	MYB family protein