PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531890.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 193aa    MW: 21593.5 Da    PI: 8.8069
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.000666890123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C+++F ++  L  H++ H
  XP_023531890.1 68 FSCNFCKRVFFSSQALGGHQNAH 90
                    89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MIFQGQQIEM SINSNGNGQA DSSEEEQEAT DQPDGVAALE WLDLSLGRKN KQLLAESQSS  60
AAASTKTFSC NFCKRVFFSS QALGGHQNAH KRERSAARRH QAHKMMTLFG LPIHNSMIRS  120
LGVQPHSLVH KPGREDTVLA ARFNHVKTGS WAPFMLGDAM DLMWPGSFRF TQHRILDKPS  180
PIEPFHLDLN LRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.12e-21C2H2 family protein