PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531987.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 391aa MW: 41405.5 Da PI: 6.5064

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531987.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.1e-12	200	245	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_023531987.1 200 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 245 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MQPCSREMQT LNSLLNNSLQ DLHGDDHHLN PPPEKIPGSQ LHHFDPVAAA SHDDFLEQML 60 HTIPSCSWPD LNPSNPKSPW DINPINKPSR DISDTSPAAK AAVMLQQQLL LSRGISSVPD 120 HGLPPMPLSL SNADLDRSHN DIVDRSCFRP PNSGGGIQSH SFGAQGNMMN QAPDGGSGGI 180 SPSQPKQKVR ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY 240 VKFLQLQVKV LSMSRLGGAA AVAPLVADVS AEGGGECMQG GRSSNGSGGN QTASSNDSVT 300 VTEQQVARLM EKDMGSAMQY LQGKGLCLMP ISLATAISTS TCPSRNPIIN GSAGHPMMGS 360 NGEGPSSPSM SVLTVQSTSM GNGSVKDAAS D

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MQPCSREMQT LNSLLNNSLQ DLHGDDHHLN PPPEKIPGSQ LHHFDPVAAA SHDDFLEQML  60
HTIPSCSWPD LNPSNPKSPW DINPINKPSR DISDTSPAAK AAVMLQQQLL LSRGISSVPD  120
HGLPPMPLSL SNADLDRSHN DIVDRSCFRP PNSGGGIQSH SFGAQGNMMN QAPDGGSGGI  180
SPSQPKQKVR ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY  240
VKFLQLQVKV LSMSRLGGAA AVAPLVADVS AEGGGECMQG GRSSNGSGGN QTASSNDSVT  300
VTEQQVARLM EKDMGSAMQY LQGKGLCLMP ISLATAISTS TCPSRNPIIN GSAGHPMMGS  360
NGEGPSSPSM SVLTVQSTSM GNGSVKDAAS D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	210	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	4e-70	bHLH family protein