PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532215.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 552aa MW: 62213.8 Da PI: 4.2506

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.5	2.2e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdee+v +yL++kv+gk+l + ++i+ vdiyk+ePwdLp+ k+++++ ewyfFs+ dkky++++r+nrat++gyWk+tgkd++v XP_023532215.1 9 LAPGFRFHPTDEEIVRYYLRRKVSGKPLCF-DTISVVDIYKSEPWDLPEksKLRTRDLEWYFFSPLDKKYSNSSRTNRATENGYWKTTGKDRPVR 102 579**********************988.89**********95246666777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_023532215.1 103 H-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MGRDSATSLA PGFRFHPTDE EIVRYYLRRK VSGKPLCFDT ISVVDIYKSE PWDLPEKSKL 60 RTRDLEWYFF SPLDKKYSNS SRTNRATENG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR 120 APRGARSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GSGPKNGEQY GAPFIEEEWE 180 NDEDLTLPGE EAVVNEGLVN VDDDMHLEVD EIVQQYFDGE LPFEYDQPLS NYLQDTINPV 240 ELPNVLVEND NKPLELQHNH GFFQLPEQYE MGGNSEKDEC FAESSGNLAE SSDNLKDEDI 300 DYLLDEPYPS VPDDLALNEE LFLEANDLSS PVETDPTGVD ILEEYLTFFD ADDNLQLSFD 360 PTELFGSEVP ISGQTIPEEK VNEVAENEFL ATKQTSVASI NDASTSKLNT QADEAGSDST 420 LPFLKRVSYL LGDIPAPPAF ASEYPSKDMA IRLNSAAQTS SSIHRTAGMI HISNSTSNYD 480 LVNTLYGKNG DVDLILFSAR HHHHGENDEM IDVLSQKNGI MGTRGGFLFF FLLFWVLILS 540 VSYKVGSCIY SH

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MGRDSATSLA PGFRFHPTDE EIVRYYLRRK VSGKPLCFDT ISVVDIYKSE PWDLPEKSKL  60
RTRDLEWYFF SPLDKKYSNS SRTNRATENG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR  120
APRGARSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GSGPKNGEQY GAPFIEEEWE  180
NDEDLTLPGE EAVVNEGLVN VDDDMHLEVD EIVQQYFDGE LPFEYDQPLS NYLQDTINPV  240
ELPNVLVEND NKPLELQHNH GFFQLPEQYE MGGNSEKDEC FAESSGNLAE SSDNLKDEDI  300
DYLLDEPYPS VPDDLALNEE LFLEANDLSS PVETDPTGVD ILEEYLTFFD ADDNLQLSFD  360
PTELFGSEVP ISGQTIPEEK VNEVAENEFL ATKQTSVASI NDASTSKLNT QADEAGSDST  420
LPFLKRVSYL LGDIPAPPAF ASEYPSKDMA IRLNSAAQTS SSIHRTAGMI HISNSTSNYD  480
LVNTLYGKNG DVDLILFSAR HHHHGENDEM IDVLSQKNGI MGTRGGFLFF FLLFWVLILS  540
VSYKVGSCIY SH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-135	NAC family protein