PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532223.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 551aa MW: 62085.7 Da PI: 4.2506

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.5	2.2e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdee+v +yL++kv+gk+l + ++i+ vdiyk+ePwdLp+ k+++++ ewyfFs+ dkky++++r+nrat++gyWk+tgkd++v XP_023532223.1 9 LAPGFRFHPTDEEIVRYYLRRKVSGKPLCF-DTISVVDIYKSEPWDLPEksKLRTRDLEWYFFSPLDKKYSNSSRTNRATENGYWKTTGKDRPVR 102 579**********************988.89**********95246666777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_023532223.1 103 H-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MGRDSATSLA PGFRFHPTDE EIVRYYLRRK VSGKPLCFDT ISVVDIYKSE PWDLPEKSKL 60 RTRDLEWYFF SPLDKKYSNS SRTNRATENG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR 120 APRGARSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GSGPKNGEQY GAPFIEEEWE 180 NDEDLTLPGE EAVVNEGLVN VDDDMHLEVD EIVQYFDGEL PFEYDQPLSN YLQDTINPVE 240 LPNVLVENDN KPLELQHNHG FFQLPEQYEM GGNSEKDECF AESSGNLAES SDNLKDEDID 300 YLLDEPYPSV PDDLALNEEL FLEANDLSSP VETDPTGVDI LEEYLTFFDA DDNLQLSFDP 360 TELFGSEVPI SGQTIPEEKV NEVAENEFLA TKQTSVASIN DASTSKLNTQ ADEAGSDSTL 420 PFLKRVSYLL GDIPAPPAFA SEYPSKDMAI RLNSAAQTSS SIHRTAGMIH ISNSTSNYDL 480 VNTLYGKNGD VDLILFSARH HHHGENDEMI DVLSQKNGIM GTRGGFLFFF LLFWVLILSV 540 SYKVGSCIYS H

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MGRDSATSLA PGFRFHPTDE EIVRYYLRRK VSGKPLCFDT ISVVDIYKSE PWDLPEKSKL  60
RTRDLEWYFF SPLDKKYSNS SRTNRATENG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR  120
APRGARSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GSGPKNGEQY GAPFIEEEWE  180
NDEDLTLPGE EAVVNEGLVN VDDDMHLEVD EIVQYFDGEL PFEYDQPLSN YLQDTINPVE  240
LPNVLVENDN KPLELQHNHG FFQLPEQYEM GGNSEKDECF AESSGNLAES SDNLKDEDID  300
YLLDEPYPSV PDDLALNEEL FLEANDLSSP VETDPTGVDI LEEYLTFFDA DDNLQLSFDP  360
TELFGSEVPI SGQTIPEEKV NEVAENEFLA TKQTSVASIN DASTSKLNTQ ADEAGSDSTL  420
PFLKRVSYLL GDIPAPPAFA SEYPSKDMAI RLNSAAQTSS SIHRTAGMIH ISNSTSNYDL  480
VNTLYGKNGD VDLILFSARH HHHGENDEMI DVLSQKNGIM GTRGGFLFFF LLFWVLILSV  540
SYKVGSCIYS H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-135	NAC family protein