PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532294.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 229aa    MW: 25378.9 Da    PI: 8.2691
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.22.1e-393998261
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    +e+ l+cprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGg++rknk+ 
  XP_023532294.1 39 PEQVLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNKRP 98
                    78999****************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MDHSSGQQEA EAQPLEDMVG MISCPKVQQE NRKAMRPQPE QVLRCPRCDS TNTKFCYYNN  60
YSLSQPRYFC KSCRRYWTKG GTLRNVPVGG SCRKNKRPSP STSSSSSPSP SSKRSYDQAA  120
NSSYAKLLNQ SNGSMGLFDT HNNYHNMYSG FGNGSSGEVE HASTETATAM KQELLPSGDQ  180
NMVSWGFPWQ FNNGDGNYMG DLDSGRESWS FNGNGIASSW HGLLNSPLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G45610.15e-45Dof family protein