PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532358.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 213aa    MW: 24069.2 Da    PI: 6.808
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532358.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-102169554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     +  E++RR++++  +++L +llP++ + ++  l+  +  e+A++YI+sL
  XP_023532358.1 21 RKVLEKNRRNQMKLLYSNLNSLLPPN-QSTDSPLTMLDQIEEAIKYIQSL 69
                    6789*********************6.479999***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MERGREAAGN QQNGSTNKVE RKVLEKNRRN QMKLLYSNLN SLLPPNQSTD SPLTMLDQIE  60
EAIKYIQSLT VKLDKVKEKK KRILTSAPTR SPSSNLPELK IKEMGSAVEV VFTTELNDRF  120
LFYEIIRIFH EERVEIINAT YSVLDDTVLY SLHAEIEDVL YAFGATKLTE RLKRLAYEWK  180
SDAEQQAAGA SSSGYGGSHP SEDTPTARYG GCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-23bHLH family protein