PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532498.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 242aa    MW: 26412.9 Da    PI: 8.828
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.8e-2193143255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+++g  +r++lg+++ta eAaka+++a+ k++g
  XP_023532498.1  93 HYRGVRRRP-WGKFAAEIRDPNKRG--ARVWLGTYDTAIEAAKAYDRAAFKMRG 143
                     69*******.**********96655..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MASGDDVSTL DFIRQHLLSD FNSIEAFASN LDFINNNGLT PQIPVAPSKI GHRRPSLNVM  60
IPPKTHSVQS PAAATATVTT SSDVKSDVGL SQHYRGVRRR PWGKFAAEIR DPNKRGARVW  120
LGTYDTAIEA AKAYDRAAFK MRGSKAILNF PLEAGKEAEE PPSTAAVGRK RRRDSEVGEM  180
ENKVVKKEEE SSETNEIGVP AAICPLTPSC WAPVWDNDGK GIFSVPPLSP HRLMGYPQCT  240
VT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169173RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.16e-56ERF family protein