PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532528.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 466aa MW: 51072.2 Da PI: 5.6529

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532528.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00069	113	135	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg+ +++ ++ +H ++ XP_023532528.1 113 FECPICGQNYRSEEEVSVHVDSC 135 89*****************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MGDVKDKVKG FMKRFNNPLS SSSSTSFKGQ GRVLGSSSSG STTSLPTRPL HNPISNPDLV 60 KPPVANSISA PPTRPHLSIK SSPERSPADG FDPFDSFITS GKKSGNGYSL NVFECPICGQ 120 NYRSEEEVSV HVDSCVDDNT ARSPADLLLT NDAESPSELE GCLGTFLSGK PSQGSLKIIL 180 TLLRNIIREP ENSKFRKIRL SNPKIKEAIG EAVGGVELLE FVGFKLQEQD GEMWATMEVP 240 TEEEINILGK VIDSIDQPKL DEQEKKGSST ASTDQLIEPK KVDRQTRVFF AIPENVAANI 300 ELPDSFYKLS VEEVKREAVM RKQKIAESQL LVPKSYKEKQ AKAARRKYNR TVIRIQFPDG 360 VVLQGVFSPW ELTSALYEFV STALKEPSLE FELIQPVGVK RRTIAHFPAV GEKAKTLDDL 420 ELVPSALVKF RPIETDAVVF TGLCNELLEI IEPLVSGSAV APPAQG

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MGDVKDKVKG FMKRFNNPLS SSSSTSFKGQ GRVLGSSSSG STTSLPTRPL HNPISNPDLV  60
KPPVANSISA PPTRPHLSIK SSPERSPADG FDPFDSFITS GKKSGNGYSL NVFECPICGQ  120
NYRSEEEVSV HVDSCVDDNT ARSPADLLLT NDAESPSELE GCLGTFLSGK PSQGSLKIIL  180
TLLRNIIREP ENSKFRKIRL SNPKIKEAIG EAVGGVELLE FVGFKLQEQD GEMWATMEVP  240
TEEEINILGK VIDSIDQPKL DEQEKKGSST ASTDQLIEPK KVDRQTRVFF AIPENVAANI  300
ELPDSFYKLS VEEVKREAVM RKQKIAESQL LVPKSYKEKQ AKAARRKYNR TVIRIQFPDG  360
VVLQGVFSPW ELTSALYEFV STALKEPSLE FELIQPVGVK RRTIAHFPAV GEKAKTLDDL  420
ELVPSALVKF RPIETDAVVF TGLCNELLEI IEPLVSGSAV APPAQG