PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532585.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 559aa MW: 63682.4 Da PI: 7.7338

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532585.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.4	1e-10	508	556	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ E++ l av+++G+g+Wk+I + Rt+ ++k++w++ XP_023532585.1 508 KRWSLLEEDTLRTAVQRFGKGNWKLILNSYReifDDRTEVDLKDKWRNM 556 69*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MDKDVCRWII EFILRSSMND HLLKRTLAVM PFPDNDFRLK KTVLLRAIES ERSEAVVTEK 60 VLAIFEMIEQ LDKTEGLAMM DSMKSAYCAV AVECTVKYLA VEGMKNNGKY FDTVSRIWRG 120 RVMELKKSGR SELVSRELEE WKDKVEVALW DKTVWKKLVN MNTRYEALKL IGDYLGEAWG 180 VLGPSFLELS ASLMDNRTRN EMPSVQLEQA IDKTAVVSED VGGSGGIELP SRTENHARPD 240 HQGSVPVLTR AETKRNDVLD MNQDSGVNDD SKRSSTVEMN TERVQELPTE TTEGQESIEK 300 EVTVLQDPSP NCRKNLKTSV LPRCKSLASH KRVRGGAKID HLEDLENDSS SGKSTCLQTP 360 EFDRVREALK TSSLELQALV KDPLPDALRI AQSVAQDLAK KNKTPEHSLE DQNDAVAANP 420 AINKGNMPLQ SMNTAFNNPC HGHQTIVPRP SIMERNSSAC TYEWNDSIDG SPERNRASRL 480 HLPSPKRKVI SPLKKYEENR LVWRRKCKRW SLLEEDTLRT AVQRFGKGNW KLILNSYREI 540 FDDRTEVDLK DKWRNMTRY

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MDKDVCRWII EFILRSSMND HLLKRTLAVM PFPDNDFRLK KTVLLRAIES ERSEAVVTEK  60
VLAIFEMIEQ LDKTEGLAMM DSMKSAYCAV AVECTVKYLA VEGMKNNGKY FDTVSRIWRG  120
RVMELKKSGR SELVSRELEE WKDKVEVALW DKTVWKKLVN MNTRYEALKL IGDYLGEAWG  180
VLGPSFLELS ASLMDNRTRN EMPSVQLEQA IDKTAVVSED VGGSGGIELP SRTENHARPD  240
HQGSVPVLTR AETKRNDVLD MNQDSGVNDD SKRSSTVEMN TERVQELPTE TTEGQESIEK  300
EVTVLQDPSP NCRKNLKTSV LPRCKSLASH KRVRGGAKID HLEDLENDSS SGKSTCLQTP  360
EFDRVREALK TSSLELQALV KDPLPDALRI AQSVAQDLAK KNKTPEHSLE DQNDAVAANP  420
AINKGNMPLQ SMNTAFNNPC HGHQTIVPRP SIMERNSSAC TYEWNDSIDG SPERNRASRL  480
HLPSPKRKVI SPLKKYEENR LVWRRKCKRW SLLEEDTLRT AVQRFGKGNW KLILNSYREI  540
FDDRTEVDLK DKWRNMTRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	7e-23	MYB_related family protein