PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532603.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 291aa    MW: 33402.9 Da    PI: 6.1769
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532603.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.75.6e-50101371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF P+deelv++yL kk+ ++++    ++ e+d++++ePw+Lp+ +k +++ewyfFs rd+kyatg r+nrat+ gyWkatgkd++v++ 
  XP_023532603.1  10 LPPGFRFYPSDEELVCHYLYKKIMNEQVVK-GTLVEIDLHTCEPWQLPEVAKLNSNEWYFFSFRDRKYATGFRTNRATTCGYWKATGKDRTVVDP 103
                     79*************************776.78***************88888999*************************************99 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++e vg++ktLvfy++rap+g kt W+mhe+r+
  XP_023532603.1 104 sTREIVGMRKTLVFYRNRAPNGIKTGWIMHEFRF 137
                     67788***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MGLKDIGASL PPGFRFYPSD EELVCHYLYK KIMNEQVVKG TLVEIDLHTC EPWQLPEVAK  60
LNSNEWYFFS FRDRKYATGF RTNRATTCGY WKATGKDRTV VDPSTREIVG MRKTLVFYRN  120
RAPNGIKTGW IMHEFRFEAP HLPPKEDWVL CRVFQKGKQE EHSIKLNQHF TFEDFERVPT  180
VIRAPSPPPS DPSPIAMPCG YNVDIASLSS MAPHQSHGYI GSCSFLHLLQ LPQEKDANNN  240
NPKADQLFCP KNDSDYGVLW DMDLEEHTFQ DGAISNLDQM AFDVESSLVF L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.13e-92NAC family protein