PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532609.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 676aa MW: 73182.8 Da PI: 6.5731

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.7e-09	474	511	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_023532609.1 474 FEHflHPYPSDGDKHLLARQTGLSRNQVSNWFINARVR 511 664459******************************88 PP
2	BELL	121.8	3e-39	330	401	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r+e+q++k+kLls+l+eVd+rY++y+eq+q+v++sF++v+g g+a pYt lA++a+SrhFrcLkdai+ q+ XP_023532609.1 330 DRNEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDVVMGFGAAVPYTVLAQNAMSRHFRCLKDAITAQL 401 589******************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MSQQDYHHAA AAAAAAAAAT LFTPFTNGFD RSSTTAVASH QDPEHQHYNH IAHQIRKEKL 60 RLQGLDPPPS QPSLVGIEEE DDDQSAGAAA LHHVYDSTGI LSEMFNFPQP PRPQAEWYGN 120 RQEINAGDSA VAMQLFLMNP NPRSPPPPPV SSTLHMLLPN PSSGGSFGQF TWGVVPEQET 180 GGGGGGGGGG GGGGGGGDYS SSNPNEGRLS LSLSSSIEAA KAEELRMSDS GLVYQNQHHP 240 QQVHVGIGSS SNSSLGVVNL LRNSKYVKPA RELLEEFCSV GRDQLKNNNN KLNNSNLTSN 300 SHGGDGGGLS SSTSKDQPQP PPPPALSAAD RNEHQRRKVK LLSMLDEVDR RYNHYCEQMQ 360 MVVNSFDVVM GFGAAVPYTV LAQNAMSRHF RCLKDAITAQ LKHSCEMLGE KDGGGGGRGG 420 SGITKGETPR LKLLEQRLRQ QRAFHQMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLHP 480 YPSDGDKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEDM YQQEAKQHQE QQEHDHNNND 540 TDEDTQSSPP PTSSAAPPPP PPPPPPPPPF SYYYSSSSSS SASTAVTQAA AANCFPANQY 600 ESELQDTCRR VSVLAAPDQQ MRTTSGSATS DIPGPTRLIR FGTTAGDVSL TLGLRHAGNI 660 PDNNPSFSLR SEFGGC

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MSQQDYHHAA AAAAAAAAAT LFTPFTNGFD RSSTTAVASH QDPEHQHYNH IAHQIRKEKL  60
RLQGLDPPPS QPSLVGIEEE DDDQSAGAAA LHHVYDSTGI LSEMFNFPQP PRPQAEWYGN  120
RQEINAGDSA VAMQLFLMNP NPRSPPPPPV SSTLHMLLPN PSSGGSFGQF TWGVVPEQET  180
GGGGGGGGGG GGGGGGGDYS SSNPNEGRLS LSLSSSIEAA KAEELRMSDS GLVYQNQHHP  240
QQVHVGIGSS SNSSLGVVNL LRNSKYVKPA RELLEEFCSV GRDQLKNNNN KLNNSNLTSN  300
SHGGDGGGLS SSTSKDQPQP PPPPALSAAD RNEHQRRKVK LLSMLDEVDR RYNHYCEQMQ  360
MVVNSFDVVM GFGAAVPYTV LAQNAMSRHF RCLKDAITAQ LKHSCEMLGE KDGGGGGRGG  420
SGITKGETPR LKLLEQRLRQ QRAFHQMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLHP  480
YPSDGDKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEDM YQQEAKQHQE QQEHDHNNND  540
TDEDTQSSPP PTSSAAPPPP PPPPPPPPPF SYYYSSSSSS SASTAVTQAA AANCFPANQY  600
ESELQDTCRR VSVLAAPDQQ MRTTSGSATS DIPGPTRLIR FGTTAGDVSL TLGLRHAGNI  660
PDNNPSFSLR SEFGGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-111	TALE family protein