PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532691.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family YABBY
Protein Properties Length: 161aa    MW: 18079.4 Da    PI: 10.3893
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY137.51.5e-424712098170
           YABBY  98 sekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     ++ + s+   +e+pr+p ++rPPekrqrvPsaynrfik+eiqrik+ nPdishreafsaaaknWahfP+ihfgl
  XP_023532691.1  47 TFGMpSRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGL 120
                     233336777899***999******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MRGLLLPSAN QFHQLGHSFF SPSHNILENI PTPNSNYLIN QFAATNTFGM PSRGVADELP  60
RPPVINRPPE KRQRVPSAYN RFIKDEIQRI KSVNPDISHR EAFSAAAKNW AHFPHIHFGL  120
MPDQTVKKTN IRQQEGDHGS VVMKDNGFYA AASPNVGVSH F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-54YABBY family protein