PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532692.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family YABBY
Protein Properties Length: 157aa    MW: 17401.7 Da    PI: 8.6228
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY137.31.8e-42261572134
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaesh...ldeslkeelleelkveeenlksnvekeesas 93 
                     ++  s+eq+Cyv+Cn C+t+lavsvP +slfk+vtvrCGhCt+ll vn++    ll++ ++   l++s+  + ++ l++  +  + + +++ +a+
  XP_023532692.1  26 HHLPSPEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGL--LLPSANQfhqLGHSFFSPSHNILENIPTPNSNYLINQFAAT 118
                     67889*****************************************777665..55555540015566555533333333333222333333333 PP

           YABBY  94 tsvssekl.senedeevprvppvirPPekrqrvPsaynrfik 134
                     ++   + + s+   +e+pr+p ++rPPekrqrvPsaynrfik
  XP_023532692.1 119 NT---FGMpSRGVADELPRPPVINRPPEKRQRVPSAYNRFIK 157
                     33...3332778899****999*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MSSSSSSPTS STTTTTQQQQ QQQLDHHLPS PEQLCYVHCN ICDTVLAVSV PCSSLFKTVT  60
VRCGHCTNLL PVNMRGLLLP SANQFHQLGH SFFSPSHNIL ENIPTPNSNY LINQFAATNT  120
FGMPSRGVAD ELPRPPVINR PPEKRQRVPS AYNRFIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.16e-39YABBY family protein