PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532963.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family LBD
Protein Properties Length: 208aa    MW: 22653.1 Da    PI: 7.6378
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260131.92.5e-41571561100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe +r+da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+a+la
  XP_023532963.1  57 PCAACKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLA 151
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_023532963.1 152 KARAE 156
                     99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MAYLAKCTNA PSTPITVPNH PLSYSPISSS SAATTNFGSP PTSQPSSPPP PTVILSPCAA  60
CKILRRRCVE KCVLAPYFPP SEPLKFTIAH RVFGASNIIK FLQELPECQR TDAVSSMVYE  120
ANARLRDPVY GSAGAICQLQ KQVSELQAQL AKARAEVANM QHQQANLLAL ICMEMRQSPD  180
PVWPPQLVDT TCFLDDAALS SPWEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.19e-72LBD family protein