PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532975.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 171aa    MW: 18351.7 Da    PI: 4.7484
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.79.2e-161967255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+G+r ++  g+Wv+eIr+p++   ++r++lg+f t+e+Aa a++ a+++l+g
  XP_023532975.1 19 LYRGIR-CR-GGKWVSEIREPRK---TTRIWLGTFPTPEMAATAYDVAALALRG 67
                    69***9.55.7*********843...5*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MASLTSSSAS SSSTKKHPLY RGIRCRGGKW VSEIREPRKT TRIWLGTFPT PEMAATAYDV  60
AALALRGDQA ILNFPSSVAS YPVPVSTSPL DIRNAAAAAA ANALNKVETC RTNIEDSGNT  120
ASFVDEEEIF GMPSLLADMA EGMMVSPPRM NSPPLSDDNS DGAECLWNYF L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-33ERF family protein