PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533012.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 271aa    MW: 29823.8 Da    PI: 5.9444
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533012.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.6e-1889139155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp   g+r r +lg+++taeeAa  + +a++kl+ 
  XP_023533012.1  89 KKFRGVRRRP-WGKWAAEIRDP---GRRVRMWLGTYDTAEEAAMVYNRAAEKLRE 139
                     59********.**********8...556************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MEVQTILCPK PTSEPPGNTA ASRIVRISMI DPEATDSSSS DEEAASLTRR RVKRYIREIT  60
IGTPPIGGGG RKMITKKKKN KKTAMGNVKK FRGVRRRPWG KWAAEIRDPG RRVRMWLGTY  120
DTAEEAAMVY NRAAEKLRES AASTNFLTPL PLTEPAIKPS SPTNLSSPTS VLQYRTHSTD  180
FSPPFQTAAT GGAAEEFPAV DFPFFDDISK SIVFEPPLLL EYETSLIQEI PWFGCDSSGG  240
GDDGDPVPAV RGEDHDYFEE ILMGSDPLVV L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-24ERF family protein