PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533029.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 174aa MW: 19254.6 Da PI: 6.2792

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	102.7	6.2e-32	34	112	9	83
TCP 9 skihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa....seceaesssssas 83 +++h+kv gRdRR+Rl+ +caar+F+L++eLG ++d++t+eWLl++a+p+i+++tg + sa + c++++ sss+ XP_023533029.1 34 KDRHAKVQGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAapelHGCKPSDPSSSTT 112 9********************************************************4444433344443333333322 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MGSKNMRVKK ATSNSPRSVP NASESKPIPS KALKDRHAKV QGRDRRIRLP PLCAARVFQL 60 TRELGNKTDG QTVEWLLKKA EPSIIAITGK DIASAAPELH GCKPSDPSSS TTTTTTAKTL 120 DGNNYAFPTV DEQVPLPNYE FDLVSDFEME LFARHFNTLQ EVPENSEREA EDDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	5e-29	TCP family protein