PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533132.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family B3
Protein Properties Length: 492aa    MW: 55866.5 Da    PI: 8.714
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533132.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.66.2e-1599182695
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     + ++ l+ + l +pkkfa+++g +   s  +tl  ++g +W ++l  ++++++ ++++GW eF + + +++g  +vF+++g+s f+  + 
  XP_023533132.1  99 VVPSILQDKKLKIPKKFAKKFGDD--LSDFVTLVVPNGYRWVLEL--KRHGRSLWFEDGWHEFIRHHCIQVGQLLVFRFEGNSVFN--FY 182
                     3455566677***********988..7779***************..*********************************999994..44 PP
2B363.82.7e-20394485499
                     E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     v+ +s+v +   l +p kf e++ +g    s ++tl+ +sg++W+v++   + + ++ lt+GW +Fv +n+Lke D++vF+l + ++  l+v++f
  XP_023533132.1 394 VMRHSYVRRGFHLHIPSKFSEKYlKG---ISGDITLQVSSGKQWRVRC--VREGPGTKLTRGWANFVMENDLKEEDVCVFELLDIKDIVLKVTIF 483
                     57789999**9************644...4568***************..77777889***********************98779999999999 PP

                     -S CS
              B3  98 rk 99 
                     r+
  XP_023533132.1 484 RA 485
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    
MNCGLEKHHN VNGLGLFVSS PFFGIIKLHI SLSFLVQTER GVLGTKNSPR NQWKVNQWSA  60
KVSVENSVTA MAESNEQHAA QSFDEPSPAR KAGLFYKLVV PSILQDKKLK IPKKFAKKFG  120
DDLSDFVTLV VPNGYRWVLE LKRHGRSLWF EDGWHEFIRH HCIQVGQLLV FRFEGNSVFN  180
FYMFNLTSIS NGSCITSNAS CEQSPIALGK EAECEKLVEL FGYSSPDPSH SSAKKAFCES  240
SEQQKFHGSS NEASTSSAKK AFCESSEQQK FHGSSNEAST KNFTHWFDTQ NLHPPKDFDY  300
TLKGLDKLQV LRSNGDIGIQ FNGDGLAKAR ENLSFQFSNE IEEGARKKKL KVEPIDYYNE  360
PLFEKKCGNI PHKITRMAFG VEEFAFGNPF CWIVMRHSYV RRGFHLHIPS KFSEKYLKGI  420
SGDITLQVSS GKQWRVRCVR EGPGTKLTRG WANFVMENDL KEEDVCVFEL LDIKDIVLKV  480
TIFRAHDFPT KT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.18e-29B3 family protein