PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533152.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 269aa    MW: 30039.4 Da    PI: 6.5268
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533152.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.8e-10148195455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  XP_023533152.1 148 SHSLAERARREKISERMKYLQNLVPGC----NKIAGKAGMLDEIINYVQSLQ 195
                     8**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MLLKSEMTMS EKQRTPVKWR RSHGDCHSLS PVSNQASRVN DFQDLLAPGG WPELTKYEFS  60
STVTCSPPPE ANSVAVGEFP KKRKANKNKE LKSKLGNAES DKRIKPNIEE EEETEKTEET  120
EETETSKQSS RASDCVHVRA RPGQATDSHS LAERARREKI SERMKYLQNL VPGCNKIAGK  180
AGMLDEIINY VQSLQQQVEF LSIKLATTNP TLDFINVDDP LCKQVFPATE ISPETVTSSS  240
YFNNQLGISS SXIWSSVQLG ETTYKGFAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.14e-45bHLH family protein