PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533210.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 189aa    MW: 21190.1 Da    PI: 5.6282
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.29.2e-063391855
                    HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      +++L +llP++ k ++  l+ ++  e+A++YIksL+
  XP_023533210.1  3 LLYSNLNSLLPPN-KSTDSPLTVSDQIEEAIKYIKSLE 39
                    56899*******7.689999****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MKLLYSNLNS LLPPNKSTDS PLTVSDQIEE AIKYIKSLEM KLQKCKEKKE RILARLNMSS  60
ALSDGASTNN NSPELRIKEM GSIVEVVFTR GFEDQSLFNE LIGVFHEERA EIINLNYSVH  120
EDMFLYSIHA EIEDVVYELG AKKLVERLNK LVYEWKSDAE MLAGGASSSG HGGTHPPANI  180
PTMSSGRHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-16bHLH family protein