PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533213.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 290aa    MW: 33161.3 Da    PI: 8.1134
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.65.2e-49151433128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                     pGfrFhPtd+elv +yL++kv++k + + e ik+vdiyk++PwdLp  + + ++kewy F+kr +ky+++ r+nr+t sg+Wkatg dk+++s+ 
  XP_023533213.1  15 PGFRFHPTDDELVGFYLRRKVDKKAMGM-ELIKSVDIYKHDPWDLPnVSNNLGDKEWYLFCKRGRKYKNSIRPNRVTGSGFWKATGIDKAIYSHg 108
                     9************************999.89***************445555999**************************************96 PP

             NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++e +glkktLv+ykg+a +g+kt+W+mhe+rl
  XP_023533213.1 109 gqGNECIGLKKTLVYYKGNAGRGTKTEWMMHEFRL 143
                     655566***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MFGEPEIDDY QFPLPGFRFH PTDDELVGFY LRRKVDKKAM GMELIKSVDI YKHDPWDLPN  60
VSNNLGDKEW YLFCKRGRKY KNSIRPNRVT GSGFWKATGI DKAIYSHGGQ GNECIGLKKT  120
LVYYKGNAGR GTKTEWMMHE FRLPSRSLNT HAPSIFPTIR NNVQEAEIWT LCRIFKRSVS  180
CAKYAPNWRE IAAGNGGSIF GDINNSDDMD DECCDRDSNY ISFSPSNYAE NKAVATHHWN  240
PLMMNFSAIS QQPPSSTTVS YFDGDATDLF GYKDRKKLQF INDPSSSFML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.11e-79NAC family protein