PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533214.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 301aa    MW: 34630.8 Da    PI: 7.5233
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM141.35.8e-44201593128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k...........kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                     pGfrFhPtdeelv++yL++kv++k+++l e ik++diy+++P++ + k             +++ekewy F+kr +ky+++ r+nr+t +g+Wka
  XP_023533214.1  20 PGFRFHPTDEELVDYYLRRKVHNKSVTL-ELIKQIDIYRYNPRTHQiKdiltycefadiGGTSGEKEWYVFVKRGRKYKNSVRPNRVTGAGFWKA 113
                     9************************999.89***********998744788888877664445899***************************** PP

             NAM  86 tgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     tg dk+++ +   ++  +glkktLvfykg+a +g+kt+W+mhe+rl
  XP_023533214.1 114 TGIDKPIYPQgeqGKGCIGLKKTLVFYKGSAGRGVKTEWMMHEFRL 159
                     ********975444445***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MAAATTTTDL DMDDYQFPLP GFRFHPTDEE LVDYYLRRKV HNKSVTLELI KQIDIYRYNP  60
RTHQIKDILT YCEFADIGGT SGEKEWYVFV KRGRKYKNSV RPNRVTGAGF WKATGIDKPI  120
YPQGEQGKGC IGLKKTLVFY KGSAGRGVKT EWMMHEFRLP PSNGSNSHNS HNSHNSHNSH  180
LPKTIINGDQ EAEIWTLCRI FKRSVTCRRY APNWKEMMKT KRCSNSVGDE CYDEDGRETY  240
ISFGCNSFNG FEEKKATKEG AAEVVNQSPA SSEFSNFEED WDELRSIVDF AFDPFFNNPS  300
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.14e-68NAC family protein