PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533595.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 243aa    MW: 26707.5 Da    PI: 6.9464
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000127294123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_023533595.1 72 YTCTFCRREFRSAQALGGHMNVH 94
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MAAHLDLLFQ YSSSSSSFLP LSQITRDGSA PNSLSPMQTP DIVVDDDDSW EVRAFAEDTA  60
DVMGTTWPPR SYTCTFCRRE FRSAQALGGH MNVHRRDRAR LHQAPSNAIK PFSSSSSSSS  120
SSTSNSFIIP THDFNGGGLC VLYPFPNPYN IRSPSSLFSM SHRSFNNFIP STSPASAFPI  180
RNHRAGASSF PQSLSDEQAM ESSNQEVDLE LRLGQAPSTQ TLMEKGHKIS NFEAACLRKR  240
SSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.19e-34C2H2 family protein