PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533663.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 194aa    MW: 22505.2 Da    PI: 9.6858
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM140.69.6e-44181492127
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdk 90 
                     +pGfrF Pt+eelv++yL+++++g++ ++++vi+ vdiy++eP +L      +++ ++++w+fF+k+++++a+g r+nr+t+  sgyWkatg+  
  XP_023533663.1  18 TPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGcsgeRCRRDSEQWFFFVKQQEREARGGRPNRTTSsgSGYWKATGSPS 112
                     69***************************99***************8445656666788********************8876689********* PP

             NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                      v+s++++++g+kkt+vfy+g+ap+g+kt+W m+ey+
  XP_023533663.1 113 YVYSSDNRVIGVKKTMVFYRGKAPTGTKTKWKMNEYK 149
                     ************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MDEARRTAGE EPADREITPG FRFFPTEEEL VSFYLHNQLQ GRRKDIHRVI PVVDIYSIEP  60
FNLSGCSGER CRRDSEQWFF FVKQQEREAR GGRPNRTTSS GSGYWKATGS PSYVYSSDNR  120
VIGVKKTMVF YRGKAPTGTK TKWKMNEYKA IEDDYSNSSS IPTPELRHEF SLCRVYVVSG  180
SFRAFDRRPL KCRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.11e-85NAC family protein