PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534076.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 180aa    MW: 20062.3 Da    PI: 9.8788
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.3e-161665255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ykG+r +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a   l+g
  XP_023534076.1 16 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFHLRG 65
                    69*****99.**********9...336**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MKGGEEERRN RENTKPYKGI RMRKWGKWVA EIREPNKRSR IWLGSYSSPV AAARAYDTAV  60
FHLRGPSARL NFPDFFTTAA ADRPFPLPAD ISASTVRKIA AEVGARVDAL ESSLRHHFHN  120
CRTADQTHQT HQTPSLSPAT TTTPTKLRSD SGGFSDRVDL NKLPDPEDSD GDCASTPWIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.11e-54ERF family protein