PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534080.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 403aa    MW: 46129.8 Da    PI: 5.0738
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534080.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.7e-19198248256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r r +lg+f+tae+Aa a+++ + kl+ge
  XP_023534080.1 198 LYRGVRQRH-WGKWVAEIRLPRN---RNRLWLGTFDTAEDAALAYDREAFKLRGE 248
                     59******9.**********965...48*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MSHFKSSDCS NFSLTQTEQH MDEDKQIDHN DFESSFRRRQ GKPVQDETSV SPRPFKKIRD  60
PENHDPIHPL DSTSQQSFPF LNPASSVSHA SPSSARALLP FALETPQFSH QFKTESVAPM  120
PHRPSLLPTH NQHQLAPPAS TPYGFGYPPY FMGEFASFQQ QQQQQQHQQF LQFWNESLDS  180
NSRGGFRPQV RPLNTTKLYR GVRQRHWGKW VAEIRLPRNR NRLWLGTFDT AEDAALAYDR  240
EAFKLRGENA RLNFPELFLN KDKEEASQTS GGELPPQKEL NNNNNLDNDF ELEPNNETVA  300
EDNIHEDEAE DAGEGVSKSQ EMVWREMAEA WLNVMPAGWG PGSPVWDDLD TTNNLLLQPH  360
LPFAHPIHQE SFTSDLQMQQ FNLTATSPSP SCSMKPFFLK DED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.12e-47ERF family protein