PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534089.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 233aa    MW: 26164.5 Da    PI: 4.9766
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534089.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.7e-1886137256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g+
  XP_023534089.1  86 NYRGVRRRP-WGKYAAEIRDSTR---QgVRVWLGTFDSAEAAALAYDQAAYSMRGA 137
                     59*******.**********322...24*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MESYYFSFSD SDFSTECSLG SPEELSFSWS DFFSINSVLE NSLSLPGEFL GHQPSESELK  60
IAVKEEIEVS SIDLEREKER KTTEKNYRGV RRRPWGKYAA EIRDSTRQGV RVWLGTFDSA  120
EAAALAYDQA AYSMRGALAV LNFPVEMVRE SLQEIKYELE EGLSPVVALK RKHSLRRKSG  180
AAAKSQGVAE TKKMKKKKNV VILEDLGTEY LEELLMLSSC ESSSSSCSSM SPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176198RRKSGAAAKSQGVAETKKMKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-43ERF family protein