PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023534102.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 259aa MW: 28336.7 Da PI: 6.8968

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023534102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.0004	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++sF++ L H +H XP_023534102.1 105 YECKTCNRSFPSFQALGGHRASH 127 99**********99999998887 PP
2	zf-C2H2	14.4	0.00011	178	200	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_023534102.1 178 HECSICGLEFSSGQALGGHMRRH 200 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
METPQEFMGS NDQIHIIPVK SHRNKRMKLL SGGADATSSS SCGGGGAGDE FAASSSVSDE 60 VSTEEEEDMA NCLILLAQGD THRRPSQITN KRLNFEKPKA GFYVYECKTC NRSFPSFQAL 120 GGHRASHKKP KPITAVEESE EPQQVNKAIP IAAAAAVQIP IKTETTTNSQ TQKSGKIHEC 180 SICGLEFSSG QALGGHMRRH RTTAVSTNTD QHDHKRRNIL ELDLNLPAPE EDLRETKFQF 240 TTTPQAIVFA APTLVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	2e-51	C2H2 family protein