PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023534137.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 619aa MW: 68163.2 Da PI: 7.597

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023534137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.5	5.5e-09	387	424	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_023534137.1 387 FEHflHPYPKDSDKVILAKQTGLTRSQVSNWFINARVR 424 554459******************************88 PP
2	BELL	113.1	1.5e-36	251	322	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rq+lq+kkakL+ +l+eV+++Y+qy++q+q+v+ sFe++aglgsak Y+slAl++iS++FrcLkdai+ q+ XP_023534137.1 251 QRQDLQMKKAKLIGMLDEVEQKYRQYHQQMQAVACSFEQAAGLGSAKCYASLALQTISKQFRCLKDAICAQV 322 699*******************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MATYFHGGSE IQASSDGIHT LYLMNPNYVP YSDTHSQTPP NMLFLNPSTH ALTPSTLPHA 60 PPSTNHFVGI PIPATDTSRP SYHEISALHS VPAQRLHYNL WTPMDQISSV SAATDSTDLS 120 FRRPRTNQGL SLSLSSQQSL YRTMSADQEI QGGRGGGAPD ISPTSGDEIR VSGNSPASAS 180 VSVVSSGVTG SKYLKAAQEL LDEVVNVGKG NKTDKGDKMK MKKESTAAIA EPSGGGAEST 240 SKLVTELSTA QRQDLQMKKA KLIGMLDEVE QKYRQYHQQM QAVACSFEQA AGLGSAKCYA 300 SLALQTISKQ FRCLKDAICA QVKASGKSLG EEDWSGGKIE GSRLRYVDHH VRQQRALQQL 360 GMIQHNTWRP QKGLPERAVS VLRAWLFEHF LHPYPKDSDK VILAKQTGLT RSQVSNWFIN 420 ARVRLWKPMV EEMYSEEIKE QEQNSDSHDI NRHNKNEPNK QNHQIMNDSL TDQVPNSLQT 480 HSGFNLVRPS SDMLSCPKRQ RTTNNLETPS TKPTLSRDIN DTKHVHGGGF GSYPIHEIET 540 RFNSELLTPR FHANGVSLTL GLPQTYLSDP NLQLGTRVDI TNGGSDFSDI DPAPATAYDG 600 VEIQTTKRFA AQLLPDFVA

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MATYFHGGSE IQASSDGIHT LYLMNPNYVP YSDTHSQTPP NMLFLNPSTH ALTPSTLPHA  60
PPSTNHFVGI PIPATDTSRP SYHEISALHS VPAQRLHYNL WTPMDQISSV SAATDSTDLS  120
FRRPRTNQGL SLSLSSQQSL YRTMSADQEI QGGRGGGAPD ISPTSGDEIR VSGNSPASAS  180
VSVVSSGVTG SKYLKAAQEL LDEVVNVGKG NKTDKGDKMK MKKESTAAIA EPSGGGAEST  240
SKLVTELSTA QRQDLQMKKA KLIGMLDEVE QKYRQYHQQM QAVACSFEQA AGLGSAKCYA  300
SLALQTISKQ FRCLKDAICA QVKASGKSLG EEDWSGGKIE GSRLRYVDHH VRQQRALQQL  360
GMIQHNTWRP QKGLPERAVS VLRAWLFEHF LHPYPKDSDK VILAKQTGLT RSQVSNWFIN  420
ARVRLWKPMV EEMYSEEIKE QEQNSDSHDI NRHNKNEPNK QNHQIMNDSL TDQVPNSLQT  480
HSGFNLVRPS SDMLSCPKRQ RTTNNLETPS TKPTLSRDIN DTKHVHGGGF GSYPIHEIET  540
RFNSELLTPR FHANGVSLTL GLPQTYLSDP NLQLGTRVDI TNGGSDFSDI DPAPATAYDG  600
VEIQTTKRFA AQLLPDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-123	TALE family protein