PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534143.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 319aa    MW: 35663.2 Da    PI: 4.5464
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534143.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.58.9e-20115165155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r++lg+++taeeAa  +++a+ +l+g
  XP_023534143.1 115 KKFRGVRQRP-WGKWAAEIRDPL----RrVRVWLGTYDTAEEAAMVYDNAAIQLRG 165
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MSMDFDSVFD LPVKFTEHRN HVKLSSMPEI TPRVVRISFT DGDATDSSSD DENEMFGRRR  60
VKKFVNEITI EPSCSGEGNG IWGVNRSARN GRRRSSGKCG VPSRSRRSVK MPDGKKFRGV  120
RQRPWGKWAA EIRDPLRRVR VWLGTYDTAE EAAMVYDNAA IQLRGPDALT NFTTQSPKKC  180
SAYDSGEESN NNICSPTSVL RCPSPPNEEA QSQLPGEPDN SSVSENFSSE FSDFSSYSDT  240
FIPDDIFAFE SSIPTLLDDE IGLHHQTNFF GDDSFFNGVF HSPIEETGFG FGFEYPTPPT  300
DDFFQDFSDV FGSDPLVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-47ERF family protein