PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534145.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 240aa    MW: 26091.6 Da    PI: 9.1264
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534145.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19121171255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  XP_023534145.1 121 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDRAAYRMRG 171
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MYHTTKTEPD FAYLGPIRRH LLGESEAAGP VFNQTGSFSS LIPCLHDNWG DLPLKVDDSE  60
DMLLAAVLGD AVGAGWVPSL GSCDFGFSAV KSEPEMIPVS FPPVQPNVAM RPAVVPQKGK  120
HYRGVRQRPW GKFAAEIRDP AKNGARVWLG TYETAEDAAL AYDRAAYRMR GSRALLNFPL  180
RVNSGEPEPV RITSKRSSPD LSSSPKRRKK ATSAVEGGGV QVEQQVASFT RGGQMFVSQC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-56ERF family protein