PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534153.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 228aa    MW: 26178.8 Da    PI: 7.5495
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534153.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.44.8e-10106146451
             AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +GV++  k+ +W A I++      +k+++lg+  + eeAa ++++a+ 
  XP_023534153.1 106 RGVYF--KNMKWQAAIKVD-----KKQIHLGTVESQEEAAHLYDRAAF 146
                     9**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVSLRRRKLL GLCTGKGSLD APVSKFSENS TAEDLEHSSI SVHPICSNEF NEIEVNPVAN  60
LETESSRVSV LDTSKEKSDE PFAEPPVKHR KRHRRKQFPE ECFLMRGVYF KNMKWQAAIK  120
VDKKQIHLGT VESQEEAAHL YDRAAFMCGR EPNFELPEAE KKELRKVNWD EFLAMTRLAI  180
ANKKQKRVSP ESKNSKLPML GNDDLNKRQD EFSDLSAPED IEQLAMKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.12e-40ERF family protein