PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534215.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 253aa    MW: 27978.9 Da    PI: 9.0137
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21.1e-1158104354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+ +ErrRR+riN  +  Lr+l+P       kK++Ka+ L +++ ++k L
  XP_023534215.1  58 KNHSDAERRRRARINAHLGSLRSLVPGG-----KKMDKATLLAEVISHLKVL 104
                     58************************87.....8**************9977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGHFSRIHSY DGFCAAIRNG SASTSSLVLD SDRGELVEAP FNLDTKGVSA ERSAAALKNH  60
SDAERRRRAR INAHLGSLRS LVPGGKKMDK ATLLAEVISH LKVLKRAAAE VSDVHIIPKE  120
IDEITVEQQE DGLEGVPYSI RASLCCDYKP GLLPDLRQAL HALDLIIKRA EIATLNGRMK  180
NVFVLTSCKG GDIETTELRR FLETSVHQAI KSVLNKFSDP QEFSFMTFPN KRRRITMFNS  240
SSSSSIGDFC FSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1231235KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.15e-33bHLH family protein