PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534490.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YC
Protein Properties Length: 229aa    MW: 25966.1 Da    PI: 9.2153
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC43.85.5e-141192081099
           NF-YC  10 iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                      e++ + k  ++P+ rikki + ++   +i  ea  l+ ka e+f+l++   ++  +   ++++l    ++++v++ + +dfl d vp++
  XP_023534490.1 119 EEEEVQEKIYTFPMQRIKKITRDENSDFRINQEALFLVNKATEMFLLQFCKDAYACCARDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEK 208
                     34444556779***********9999999**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MASTKKSSTE IKSKEAGTSK PATKTTKTLN ARKSDKNDSK KKKKKIYSNK HSNNGSVKED  60
DAVFISAPGS ASEEEDAGEE RAETTSKKAK TSKSKVGKWN HVKKEENGYA EQEEEEEEEE  120
EEVQEKIYTF PMQRIKKITR DENSDFRINQ EALFLVNKAT EMFLLQFCKD AYACCARDRK  180
KSLAYKHLSS VVSKRKRYDF LSDFVPEKLK FEDAVKEIGM AESGKGEAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179197RKKSLAYKHLSSVVSKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.12e-31NF-YC family protein