PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534533.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HD-ZIP
Protein Properties Length: 756aa    MW: 83542.8 Da    PI: 6.0838
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.41.6e-2094150157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k+
  XP_023534533.1  94 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKN 150
                     688999************************************************995 PP
2START222.21.6e-692845041206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el ++a+++ep+W++s       +n+de+l++f+++ +     ++ ea+r+s+vv+m++ +lve+l+d++ qW++ +     +a+tl
  XP_023534533.1 284 ELAVAAMEELTRMAQLGEPLWMTSLdgstNVLNEDEYLRTFPRGIGpkpsgFKCEASRESAVVIMNHINLVEILMDVN-QWSTLFSgivsRAMTL 377
                     57899********************9999999***********999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m++e+q++splvp R++++vRy++q+ +g+w++vdvS+d  ++ p    + R++++pSg+li++++ng+skvtwvehv
  XP_023534533.1 378 EVLSTGvagnynGALQVMTSEFQVPSPLVPtRESYYVRYCKQHVDGTWAVVDVSLDDLRPTP----GLRCRRRPSGCLIQEMPNGYSKVTWVEHV 468
                     ************************************************************99....6**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wv tl+rqce+
  XP_023534533.1 469 EVDDRGVHSLYKQLVSSGQAFGAKRWVTTLDRQCER 504
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 756 aa     Download sequence    
MGITLLDFTH LMNLFFLRFK THKLSWKNLK DLSKMFQPSI FDDGKLLPLD MPQNTSDSDF  60
ARIRDDDFDS ATKSGSDNNH ELASGDDQDP RPKKKRYHRH TQHQIQEMEA FFKECPHPDD  120
KQRKELSREL GLEPLQVKFW FQNKRTQMKN QHERHENTQL RTENEKLRAD NMRYREALSN  180
ASCPNCGGPT AIGEMSFDEH HLRLENARLR EEIDRISAIA AKYVGKPVVN YPLLSPPVPS  240
RPLELGMGNF GPQSGLGGDI YGSAGDLIRS ISAPTEADKP MIIELAVAAM EELTRMAQLG  300
EPLWMTSLDG STNVLNEDEY LRTFPRGIGP KPSGFKCEAS RESAVVIMNH INLVEILMDV  360
NQWSTLFSGI VSRAMTLEVL STGVAGNYNG ALQVMTSEFQ VPSPLVPTRE SYYVRYCKQH  420
VDGTWAVVDV SLDDLRPTPG LRCRRRPSGC LIQEMPNGYS KVTWVEHVEV DDRGVHSLYK  480
QLVSSGQAFG AKRWVTTLDR QCERLASAMA TNIPTGDVGV ITNQEGRKSM LKLAERMVIS  540
FCAGVSASTT HTWTTLSGTG ADDVRVMTRK SIDDPGRPPG IVLSAATSFW LPVPPKRIFD  600
FLRDENSRSE WDILSNGGVV QEMAHIANGR DTGNCVSLLR VNSANSSQSN MLILQESCTD  660
PTASFVIYAP VDIVAMNVVL NGGDPDYVAL LPSGFAILPD GTAETATGGS LLTVAFQILV  720
DSVPTAKLSL GSVATVNNLI ACTAERIKAS LSCETA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein