PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023534546.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 334aa MW: 37952.2 Da PI: 7.6598

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023534546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.9	9.9e-50	18	144	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPtdeelv++yL++kv++k+l + e ik++diyk+ PwdLp ++ + +ekewyfF+kr +ky+++ r+nr+t+sg+Wkatg dk+++ + XP_023534546.1 18 PGFRFHPTDEELVDFYLRRKVHNKPLAI-ELIKQIDIYKYSPWDLPhASNAVGEKEWYFFCKRGRKYKNSGRPNRVTESGFWKATGIDKPIYGHt 111 9**********************999.89***********445555899*********************************975 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLv+y+g+a kg+kt+W+m+e+rl XP_023534546.1 112 HHGCIGLKKTLVYYRGSAGKGTKTEWMMNEFRL 144 6667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MATPSQFDMP DDDQLPLPGF RFHPTDEELV DFYLRRKVHN KPLAIELIKQ IDIYKYSPWD 60 LPHASNAVGE KEWYFFCKRG RKYKNSGRPN RVTESGFWKA TGIDKPIYGH THHGCIGLKK 120 TLVYYRGSAG KGTKTEWMMN EFRLPSSSSS SSSSSSSSSS SSSSTSTSRH PFGTMIKNSL 180 QEAEIWTLCR IFKRNISTRK AISTHNWREI PAPKSQSMEV MNFRATTNDI NIDRCLSDNQ 240 ESRYIGFASH NSFITFDHVK EVQSSPQIQM VHGGRFMTRF CGPTDQPSSA DHNSPTNVSP 300 SSSSFSDFDE DATDLFGYEK WEELKSILES DLDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	3e-77	NAC family protein