PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534548.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 254aa    MW: 28317.6 Da    PI: 6.1679
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534548.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP269.27.5e-22103154156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     ++++GVr+++ +grW+AeIrdp+    r kr++lg+f taeeAa+ +++a++kl+g+
  XP_023534548.1 103 KKFRGVRQRP-WGRWAAEIRDPT----RrKRIWLGTFNTAEEAAAVYDRAALKLHGP 154
                     59********.**********84....34**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MSVGEMGFSP ERRINHRRKP PSSGDSLELQ QKLVRIIVTD ADATDSSSDD EMVSGSTKGI  60
RRQVREIPIG CYSVFYGSSE SPVPAISKKR STRSQSSKSS HRKKFRGVRQ RPWGRWAAEI  120
RDPTRRKRIW LGTFNTAEEA AAVYDRAALK LHGPNAETNF SDEGEVSTAA KGGNKQEDEL  180
ESPKTTTVWS PASVLHYDGA LPLIDEMFCR EIDEFGFNME AVARLPAARR QCGGGEEDFG  240
EVELDLDYFL VDVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-23ERF family protein