PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023534709.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

YABBY

Protein Properties

Length: 138aa MW: 15396.4 Da PI: 10.4812

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023534709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	162.5	3.2e-50	1	127	31	169
YABBY 31 lfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrv 125 +f++vtvrCGhCt+llsvn+ + q+l+ ++ + +++ l + e++ k +++++ s+ s e+ +++ r+pp irPPekrqr+ XP_023534709.1 1 MFTLVTVRCGHCTNLLSVNMGASLQVLPPQEG---HKQPQ----LTSPEDSSKDRGSSSSKCSKIGSL----ESAERDQHRIPP-IRPPEKRQRI 83 699**********************99985...22222....222222222222222222222222....344555566667.9***** PP YABBY 126 PsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 Psaynrfik eiqrika+nPdishreafs+aaknWah+P+ih g XP_023534709.1 84 PSAYNRFIKAEIQRIKANNPDISHREAFSTAAKNWAHLPHIHLG 127 ****************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence
MFTLVTVRCG HCTNLLSVNM GASLQVLPPQ EGHKQPQLTS PEDSSKDRGS SSSKCSKIGS 60 LESAERDQHR IPPIRPPEKR QRIPSAYNRF IKAEIQRIKA NNPDISHREA FSTAAKNWAH 120 LPHIHLGQKL DGNNKQSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	2e-53	YABBY family protein